MLOC_33237 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.114680.3579010.165905
LEAShoots from the seedlings (10 cm shoot stage)0.856930.6412220.2493410.437173
INF1Young developing inflorescences (5mm)1.133520.6361161.243840.661413
INF2Developing inflorescences (1-1.5 cm)1.802972.186151.738051.74328
ROORoots from the seedlings (10 cm shoot stage)0.1036050.118370.6130540.15446
NODDeveloping tillers at six leaf stage, 3rd internode0.4313960.4523930.5169851.31136
CAR5Developing grain, bracts removed (5 DPA)0.8835830.4943681.001220.602443
CAR15Developing grain, bracts removed (15 DPA)0.3284030.4620780.2886070.654968



CDS Structure of MLOC_33237






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_33237.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_33237.2CUST_12101_PI427708083AvailableAvailablecontig_235599 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g49110.2 +1 1e-20 94 43/46 (93%) 13106.m05239 protein delta-aminolevulinic acid dehydratase, chloroplast precursor, putative, expressed
TAIR PP10 AT1G69740.2 +1 7e-21 94 43/46 (93%) | Symbols: HEMB1 | Aldolase superfamily protein | chr1:26232197-26234713 FORWARD LENGTH=430