- Predicted Gene MLOC_33219
MLOC_33219 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_33219_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_33219_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 33.6098 | 24.6207 | 22.5427 | 25.5569 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.20785 | 12.4034 | 7.4963 | 6.26469 |
INF1 | Young developing inflorescences (5mm) | 0.0324021 | 0.353382 | 2.5028 | 0.895829 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.068905 | 0 | 0 | 0.0865672 |
ROO | Roots from the seedlings (10 cm shoot stage) | 18.5892 | 15.2672 | 25.5161 | 17.7257 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.380462 | 0.150783 | 0.238352 | 0.360679 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.22078 | 2.32954 | 1.99954 | 2.58367 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.04217 | 0.980238 | 0.923914 | 2.60008 |
CDS Structure of MLOC_33219
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_33219.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g33710.1 |
+1 |
7e-121 |
354 |
157/200 (79%) |
13108.m03517 protein ribonuclease T2 family domain containing protein, expressed |
TAIR PP10 |
AT2G02990.1 |
+1 |
1e-93 |
283 |
120/199 (60%) |
| Symbols: RNS1, ATRNS1 | ribonuclease 1 | chr2:873714-874667 FORWARD LENGTH=230 |