MLOC_3320 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3417920.1447040.1895930.22497
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)1.000231.006950.8989221.37077
NODDeveloping tillers at six leaf stage, 3rd internode0.04557620.7023780.9490892.41237
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0.0468400.06852160.140223



CDS Structure of MLOC_3320






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_3320.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_3320.1CUST_4688_PI427708083AvailableAvailablecontig_12972 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g40170.1 +2 8e-12 64 27/42 (64%) 13105.m04237 protein expressed protein
TAIR PP10None-----