MLOC_33165 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)15.495222.93926.340716.8315
CAR15Developing grain, bracts removed (15 DPA)1.118530.47574702.11162



CDS Structure of MLOC_33165






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_33165.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_33165.1CUST_4684_PI427708083AvailableAvailablecontig_235 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g05970.1 -1 3e-14 67 34/34 (100%) 13101.m00583 protein OsFBO1 - F-box and other domain containing protein, expressed
TAIR PP10 AT3G09480.1 -1 9e-15 67 34/34 (100%) Histone superfamily protein | chr3:2914890-2915270 REVERSE LENGTH=126