MLOC_33124 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.094724.896626.894284.91207
LEAShoots from the seedlings (10 cm shoot stage)7.023874.555968.440045.5725
INF1Young developing inflorescences (5mm)7.472719.0346911.97358.42831
INF2Developing inflorescences (1-1.5 cm)6.7440811.778514.206412.2933
ROORoots from the seedlings (10 cm shoot stage)5.8877610.534118.865412.4487
NODDeveloping tillers at six leaf stage, 3rd internode6.861419.501711.313329.5179
CAR5Developing grain, bracts removed (5 DPA)9.059038.355289.220868.84564
CAR15Developing grain, bracts removed (15 DPA)4.210753.911046.3282411.038



CDS Structure of MLOC_33124






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_33124.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_33124.1CUST_4679_PI427708083AvailableAvailablecontig_234647 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g32780.1 -2 5e-27 101 48/77 (62%) 13101.m03305 protein universal stress protein domain containing protein, putative, expressed
TAIR PP10 AT1G68300.1 -2 9e-14 65 28/68 (41%) Adenine nucleotide alpha hydrolases-like superfamily protein | chr1:25598518-25599261 REVERSE LENGTH=160