MLOC_33103 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.675444.417783.240613.37642
LEAShoots from the seedlings (10 cm shoot stage)3.761516.370615.050724.27165
INF1Young developing inflorescences (5mm)6.28577.081938.473375.61562
INF2Developing inflorescences (1-1.5 cm)11.14179.39199.1128910.8089
ROORoots from the seedlings (10 cm shoot stage)0.8680493.478162.329173.79332
NODDeveloping tillers at six leaf stage, 3rd internode2.109065.160124.5940716.6746
CAR5Developing grain, bracts removed (5 DPA)6.045145.6756.926965.88778
CAR15Developing grain, bracts removed (15 DPA)3.674113.661222.857457.8466



CDS Structure of MLOC_33103






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_33103.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_33103.1CUST_11023_PI427708080AvailableAvailablecontig_234510 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g26510.1 -3 1e-18 86 49/125 (39%) 13102.m02870 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----