MLOC_33094 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.626487.262745.640675.58963
LEAShoots from the seedlings (10 cm shoot stage)8.448749.968847.048336.92321
INF1Young developing inflorescences (5mm)10.381510.62899.394568.53699
INF2Developing inflorescences (1-1.5 cm)12.292314.612313.108514.5659
ROORoots from the seedlings (10 cm shoot stage)2.303036.292944.172856.53294
NODDeveloping tillers at six leaf stage, 3rd internode2.481183.151353.3951710.0678
CAR5Developing grain, bracts removed (5 DPA)10.840510.784111.01610.4782
CAR15Developing grain, bracts removed (15 DPA)4.433564.966994.4832610.9374



CDS Structure of MLOC_33094






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_33094.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_33094.1CUST_11022_PI427708080AvailableAvailablecontig_2344275 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g17340.1 +2 1e-52 188 105/141 (74%) 13103.m02072 protein expressed protein
TAIR PP10 AT3G08800.1 +2 3e-41 159 108/302 (36%) ARM repeat superfamily protein | chr3:2671148-2674910 FORWARD LENGTH=936