- Predicted Gene MLOC_33074
MLOC_33074 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_33074_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_33074_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 14.406 | 23.5769 | 19.756 | 18.4612 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 11.846 | 12.158 | 11.1464 | 8.95698 |
INF1 | Young developing inflorescences (5mm) | 14.6421 | 13.0258 | 14.1639 | 11.2453 |
INF2 | Developing inflorescences (1-1.5 cm) | 17.3662 | 15.2382 | 14.9407 | 16.5949 |
ROO | Roots from the seedlings (10 cm shoot stage) | 9.33552 | 10.5691 | 10.1577 | 10.9086 |
NOD | Developing tillers at six leaf stage, 3rd internode | 11.788 | 5.30307 | 4.89314 | 14.5278 |
CAR5 | Developing grain, bracts removed (5 DPA) | 15.0964 | 14.5333 | 14.0307 | 13.4606 |
CAR15 | Developing grain, bracts removed (15 DPA) | 6.94149 | 5.08867 | 6.04978 | 14.3195 |
CDS Structure of MLOC_33074
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_33074.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g42000.1 |
+3 |
1e-31 |
122 |
69/88 (78%) |
13104.m04132 protein 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor, putative, expressed |
TAIR PP10 |
AT2G44050.1 |
+3 |
6e-14 |
71 |
42/82 (51%) |
| Symbols: COS1 | 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase | chr2:18224304-18225917 FORWARD LENGTH=227 |