MLOC_3306 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.669534.747943.608413.57269
LEAShoots from the seedlings (10 cm shoot stage)21.634513.883413.659513.5168
INF1Young developing inflorescences (5mm)7.5536412.527611.76518.01009
INF2Developing inflorescences (1-1.5 cm)10.252910.94589.5187510.4464
ROORoots from the seedlings (10 cm shoot stage)0.5115181.756334.037941.93372
NODDeveloping tillers at six leaf stage, 3rd internode7.8979812.395315.504238.8167
CAR5Developing grain, bracts removed (5 DPA)6.144064.067085.835364.66466
CAR15Developing grain, bracts removed (15 DPA)5.381054.254436.171910.4066



CDS Structure of MLOC_3306






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK353595
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK353595NoneNoneNoneNone
MLOC_1881.1NoneAvailableNonecontig_116773 (Not mapped)
MLOC_30565.1NoneAvailableNonecontig_2109607 (Mapped)
MLOC_30738.1NoneAvailableNonecontig_212252 (Mapped)
MLOC_31233.1NoneAvailableNonecontig_216934 (Not mapped)
MLOC_3306.1NoneAvailableAvailablecontig_129575 (Mapped)
MLOC_42842.1NoneAvailableNonecontig_266545 (Not mapped)
MLOC_50496.1NoneAvailableNonecontig_36088 (Not mapped)
MLOC_63520.1NoneAvailableNonecontig_476630 (Not mapped)
MLOC_74795.1NoneAvailableNonecontig_665421 (Not mapped)
MLOC_9253.1NoneAvailableNonecontig_150545 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----