MLOC_33035 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3287780.5598221.3190.659053
LEAShoots from the seedlings (10 cm shoot stage)2.371580.7938941.259911.39622
INF1Young developing inflorescences (5mm)2.044511.011271.281631.3714
INF2Developing inflorescences (1-1.5 cm)1.919982.566082.48372.81261
ROORoots from the seedlings (10 cm shoot stage)0.5182041.278381.974691.96155
NODDeveloping tillers at six leaf stage, 3rd internode2.164592.537451.943079.20201
CAR5Developing grain, bracts removed (5 DPA)1.206441.798921.860421.83966
CAR15Developing grain, bracts removed (15 DPA)0.294780.9163390.2215681.30055



CDS Structure of MLOC_33035






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_33035.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_33035.1CUST_4663_PI427708083AvailableAvailablecontig_233941 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g09089.2 -3 1e-23 96 48/76 (63%) 13112.m00965 protein protein kinase PKN/PRK1, effector, putative, expressed
TAIR PP10None-----