- Predicted Gene MLOC_32988
MLOC_32988 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 48.2044 | 40.9169 | 43.445 | 39.9317 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 36.5788 | 22.3642 | 25.6398 | 22.4325 |
INF1 | Young developing inflorescences (5mm) | 43.3374 | 42.3054 | 43.0808 | 33.7817 |
INF2 | Developing inflorescences (1-1.5 cm) | 32.6763 | 32.1961 | 31.9414 | 32.4143 |
ROO | Roots from the seedlings (10 cm shoot stage) | 39.5871 | 36.6912 | 35.4695 | 39.8229 |
NOD | Developing tillers at six leaf stage, 3rd internode | 31.3542 | 32.6529 | 55.0077 | 111.036 |
CAR5 | Developing grain, bracts removed (5 DPA) | 68.8014 | 72.1484 | 73.2999 | 62.934 |
CAR15 | Developing grain, bracts removed (15 DPA) | 73.3019 | 70.6694 | 60.9449 | 151.334 |
CDS Structure of MLOC_32988
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_32988.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g47590.1 |
+1 |
0.0 |
601 |
309/370 (84%) |
13102.m05363 protein ornithine carbamoyltransferase, putative, expressed |
TAIR PP10 |
AT1G75330.1 |
+1 |
1e-174 |
503 |
246/307 (80%) |
| Symbols: OTC | ornithine carbamoyltransferase | chr1:28266457-28268383 REVERSE LENGTH=375 |