MLOC_32988 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains48.204440.916943.44539.9317
LEAShoots from the seedlings (10 cm shoot stage)36.578822.364225.639822.4325
INF1Young developing inflorescences (5mm)43.337442.305443.080833.7817
INF2Developing inflorescences (1-1.5 cm)32.676332.196131.941432.4143
ROORoots from the seedlings (10 cm shoot stage)39.587136.691235.469539.8229
NODDeveloping tillers at six leaf stage, 3rd internode31.354232.652955.0077111.036
CAR5Developing grain, bracts removed (5 DPA)68.801472.148473.299962.934
CAR15Developing grain, bracts removed (15 DPA)73.301970.669460.9449151.334



CDS Structure of MLOC_32988






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_32988.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374715NoneNoneNoneNone
MLOC_32988.1CUST_2134_PI427708080AvailableAvailablecontig_233570 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g47590.1 +1 0.0 601 309/370 (84%) 13102.m05363 protein ornithine carbamoyltransferase, putative, expressed
TAIR PP10 AT1G75330.1 +1 1e-174 503 246/307 (80%) | Symbols: OTC | ornithine carbamoyltransferase | chr1:28266457-28268383 REVERSE LENGTH=375