- Predicted Gene MLOC_32982
MLOC_32982 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_32982_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_32982_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.816773 | 1.32716 | 1.58078 | 0.946834 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.25042 | 2.60026 | 1.9348 | 1.67032 |
INF1 | Young developing inflorescences (5mm) | 3.35068 | 2.74528 | 3.43013 | 2.01124 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.56563 | 4.43031 | 4.14018 | 4.39908 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.31737 | 0.641229 | 1.57445 | 0.899869 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.25784 | 2.76173 | 4.84569 | 9.34324 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.30353 | 2.13923 | 2.62085 | 1.81068 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.08273 | 0.867665 | 1.18618 | 1.82541 |
CDS Structure of MLOC_32982
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_32982.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g43140.1 |
+1 |
2e-36 |
144 |
97/202 (48%) |
13104.m04275 protein DEAD-box ATP-dependent RNA helicase, putative, expressed |
TAIR PP10 |
AT3G16840.1 |
+1 |
7e-16 |
80 |
55/178 (31%) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr3:5738020-5743042 REVERSE LENGTH=826 |