MLOC_32826 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)00.7702152.666631.62624
INF1Young developing inflorescences (5mm)00.41272800.339118
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.7480491.270430.4858574.32554
CAR5Developing grain, bracts removed (5 DPA)00.38752900.418458
CAR15Developing grain, bracts removed (15 DPA)000.629760.684542



CDS Structure of MLOC_32826






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_32826.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_32826.1CUST_4638_PI427708083AvailableAvailablecontig_232340 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g45070.2 +2 1e-33 124 59/65 (91%) 13102.m05052 protein PINHEAD, putative, expressed
TAIR PP10 AT1G48410.1 +2 5e-34 124 59/65 (91%) | Symbols: AGO1 | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | chr1:17886285-17891892 REVERSE LENGTH=1048