MLOC_328 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.471868.787757.429170
LEAShoots from the seedlings (10 cm shoot stage)6.517823.572433.342580
INF1Young developing inflorescences (5mm)9.47088.055547.100010
INF2Developing inflorescences (1-1.5 cm)5.322494.336224.487460
ROORoots from the seedlings (10 cm shoot stage)6.725094.904735.907880
NODDeveloping tillers at six leaf stage, 3rd internode4.768971.234842.271130
CAR5Developing grain, bracts removed (5 DPA)5.823874.710334.258410
CAR15Developing grain, bracts removed (15 DPA)2.245982.104442.159430



CDS Structure of MLOC_328






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK371135
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371135CUST_22077_PI427708080NoneNoneNone
MLOC_24444.1NoneAvailableNonecontig_1644990 (Mapped)
MLOC_24445.1NoneAvailableNonecontig_1644990 (Mapped)
MLOC_328.1NoneAvailableNonecontig_102325 (Mapped)
MLOC_48674.1NoneAvailableNonecontig_32776 (Not mapped)
MLOC_7528.1NoneAvailableAvailablecontig_139463 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----