MLOC_32780 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains534.98478.519442.687625.797
LEAShoots from the seedlings (10 cm shoot stage)190.70625.68740.203379.3645
INF1Young developing inflorescences (5mm)1087.511015.95978.5431109.91
INF2Developing inflorescences (1-1.5 cm)877.4911066.72702.1721369.43
ROORoots from the seedlings (10 cm shoot stage)256.621324.093354.751519.093
NODDeveloping tillers at six leaf stage, 3rd internode2.593943.002372.3722211.8916
CAR5Developing grain, bracts removed (5 DPA)353.344274.083285.561408.281
CAR15Developing grain, bracts removed (15 DPA)24.174615.909922.671861.2866



CDS Structure of MLOC_32780






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK251792.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251792.1CUST_19069_PI427708080NoneNoneNone
MLOC_32780.1NoneAvailableAvailablecontig_2318978 (Not mapped)
MLOC_45565.1NoneAvailableNonecontig_279098 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----