MLOC_32747 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2717130.2372470.2835680.278095
LEAShoots from the seedlings (10 cm shoot stage)0.15345300.0263840.0909693
INF1Young developing inflorescences (5mm)3.367686.680195.052394.34878
INF2Developing inflorescences (1-1.5 cm)0.76590.5053980.289650.613478
ROORoots from the seedlings (10 cm shoot stage)0.06563070.2341370.4618710.306551
NODDeveloping tillers at six leaf stage, 3rd internode0.1220710.125130.2757510.536163
CAR5Developing grain, bracts removed (5 DPA)0.3088410.2818740.2807510.291976
CAR15Developing grain, bracts removed (15 DPA)0.1031480.07250650.1768540.250031



CDS Structure of MLOC_32747






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_32747.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_32747.1CUST_10991_PI427708080AvailableAvailablecontig_231639 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g45250.1 +1 0.0 771 402/752 (53%) 13107.m04766 protein transposon protein, putative, unclassified
TAIR PP10 AT1G49920.1 +1 3e-25 112 109/472 (23%) MuDR family transposase | chr1:18481798-18484233 REVERSE LENGTH=785