MLOC_32746 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.064432.373051.683662.18139
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.5614110.3079190.4393070.427073
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.085759000.157908
CAR15Developing grain, bracts removed (15 DPA)000.04161410.0970508



CDS Structure of MLOC_32746






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_32746.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_32746.1NoneAvailableAvailablecontig_231632 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g04300.1 +1 8e-117 353 186/307 (61%) 13101.m00388 protein glycosyl hydrolase family 10 protein, putative, expressed
TAIR PP10 AT1G58370.1 +1 3e-63 217 125/294 (43%) | Symbols: RXF12, ATXYN1 | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein | chr1:21684751-21688209 FORWARD LENGTH=917