- Predicted Gene MLOC_32710
MLOC_32710 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_32710_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_32710_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 51.9315 | 43.355 | 51.6236 | 43.8676 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 41.4677 | 45.3852 | 41.763 | 33.0114 |
INF1 | Young developing inflorescences (5mm) | 35.5647 | 48.124 | 47.5333 | 32.8945 |
INF2 | Developing inflorescences (1-1.5 cm) | 33.3699 | 29.1368 | 29.046 | 30.8628 |
ROO | Roots from the seedlings (10 cm shoot stage) | 30.4316 | 34.9886 | 36.8296 | 36.4795 |
NOD | Developing tillers at six leaf stage, 3rd internode | 80.4535 | 72.6824 | 75.3911 | 209.761 |
CAR5 | Developing grain, bracts removed (5 DPA) | 42.3563 | 45.824 | 47.9315 | 40.1111 |
CAR15 | Developing grain, bracts removed (15 DPA) | 32.6561 | 30.0071 | 35.1023 | 69.5328 |
CDS Structure of MLOC_32710
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_32710.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g09080.1 |
+1 |
0.0 |
662 |
335/366 (92%) |
13103.m01049 protein ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed |
TAIR PP10 |
AT4G39910.1 |
+1 |
0.0 |
602 |
305/370 (82%) |
| Symbols: ATUBP3, UBP3 | ubiquitin-specific protease 3 | chr4:18511858-18514139 REVERSE LENGTH=371 |