MLOC_32662 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.468115.354414.717214.1548
LEAShoots from the seedlings (10 cm shoot stage)36.630159.254162.742744.4704
INF1Young developing inflorescences (5mm)0.8563310.8190860.922090.757227
INF2Developing inflorescences (1-1.5 cm)0.6210290.2488452.277060.935477
ROORoots from the seedlings (10 cm shoot stage)41.97131.755927.20737.6247
NODDeveloping tillers at six leaf stage, 3rd internode12.501617.66811.213749.1211
CAR5Developing grain, bracts removed (5 DPA)2.708552.335741.983672.30582
CAR15Developing grain, bracts removed (15 DPA)1.074280.8624470.6717492.16944



CDS Structure of MLOC_32662






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_32662.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362380NoneNoneNoneNone
MLOC_32662.1CUST_2130_PI427708080AvailableAvailablecontig_230813 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g21540.1 -2 0.0 950 514/862 (60%) 13103.m02581 protein TKL_IRAK_CrRLK1L-1.8 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed
TAIR PP10 AT3G51550.1 -2 0.0 555 284/407 (70%) | Symbols: FER | Malectin/receptor-like protein kinase family protein | chr3:19117877-19120564 REVERSE LENGTH=895