MLOC_32627 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.873496.687416.517046.0745
LEAShoots from the seedlings (10 cm shoot stage)7.37653.431314.706564.57183
INF1Young developing inflorescences (5mm)19.475820.439721.325816.2043
INF2Developing inflorescences (1-1.5 cm)21.485925.188122.503824.5517
ROORoots from the seedlings (10 cm shoot stage)3.582145.295574.413516.10696
NODDeveloping tillers at six leaf stage, 3rd internode4.454056.70484.8455620.4583
CAR5Developing grain, bracts removed (5 DPA)11.331811.865412.349911.2848
CAR15Developing grain, bracts removed (15 DPA)2.936912.536643.760766.29829



CDS Structure of MLOC_32627






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_32627.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_32627.1CUST_10979_PI427708080AvailableAvailablecontig_230422 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g19830.1 +1 3e-120 399 201/296 (68%) 13109.m01868 protein histone-lysine N-methyltransferase, putative, expressed
TAIR PP10 AT2G22740.1 +1 8e-96 322 163/289 (56%) | Symbols: SUVH6, SDG23 | SU(VAR)3-9 homolog 6 | chr2:9664256-9666628 REVERSE LENGTH=790