MLOC_32600 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0.3765291.146230.7060030.582873
INF1Young developing inflorescences (5mm)0.08417110.06265330.02575310.0487157
INF2Developing inflorescences (1-1.5 cm)0.05219820.03215170.1203960.0602813
ROORoots from the seedlings (10 cm shoot stage)00.043613200.123232
NODDeveloping tillers at six leaf stage, 3rd internode0.05543790.1230160.1423580.40821
CAR5Developing grain, bracts removed (5 DPA)0.04279930.01935320.04792260.0373793
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_32600






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_32600.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_32600.1CUST_10976_PI427708080AvailableAvailablecontig_230151 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g34390.1 +1 0.0 861 431/707 (61%) 13104.m03338 protein serine/threonine-protein kinase receptor precursor, putative, expressed
TAIR PP10 AT2G19130.1 +1 0.0 619 332/712 (47%) S-locus lectin protein kinase family protein | chr2:8293789-8296275 FORWARD LENGTH=828