MLOC_32599 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains23.662112.132713.4616.1628
LEAShoots from the seedlings (10 cm shoot stage)7.24281.015421.888433.0046
INF1Young developing inflorescences (5mm)35.920638.89641.540434.4186
INF2Developing inflorescences (1-1.5 cm)23.995638.387137.357538.04
ROORoots from the seedlings (10 cm shoot stage)12.58179.5248613.730812.4692
NODDeveloping tillers at six leaf stage, 3rd internode0.3818650.5260480.6523681.61472
CAR5Developing grain, bracts removed (5 DPA)10.569114.109711.446712.4546
CAR15Developing grain, bracts removed (15 DPA)0.9668690.6258861.364332.33682



CDS Structure of MLOC_32599






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_32599.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_32599.1NoneAvailableAvailablecontig_230151 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g05730.1 +1 3e-69 219 112/113 (99%) 13111.m00557 protein histone H3, putative, expressed
TAIR PP10 AT5G65360.1 +1 1e-69 219 112/113 (99%) Histone superfamily protein | chr5:26120099-26120509 REVERSE LENGTH=136