- Predicted Gene MLOC_32593
MLOC_32593 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_32593_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_32593_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 13.9173 | 15.9799 | 13.0627 | 12.7487 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 20.2457 | 16.276 | 21.7113 | 14.4451 |
INF1 | Young developing inflorescences (5mm) | 18.3821 | 21.256 | 20.9477 | 14.3937 |
INF2 | Developing inflorescences (1-1.5 cm) | 18.5457 | 21.7504 | 21.2671 | 19.4554 |
ROO | Roots from the seedlings (10 cm shoot stage) | 12.0519 | 18.061 | 15.5104 | 16.5759 |
NOD | Developing tillers at six leaf stage, 3rd internode | 18.0513 | 33.1937 | 37.8135 | 91.9996 |
CAR5 | Developing grain, bracts removed (5 DPA) | 20.0967 | 21.2322 | 22.1972 | 17.4082 |
CAR15 | Developing grain, bracts removed (15 DPA) | 12.1421 | 12.0501 | 10.0064 | 23.2459 |
CDS Structure of MLOC_32593
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_32593.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g40780.1 |
+3 |
0.0 |
728 |
378/439 (86%) |
13110.m03782 protein CCR4-Not complex component, Not1domain containing protein, expressed |
TAIR PP10 |
AT1G02080.2 |
+3 |
2e-180 |
576 |
301/429 (70%) |
transcription regulators | chr1:373694-386682 FORWARD LENGTH=2377 |