MLOC_32533 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.571492.444173.295213.3962
LEAShoots from the seedlings (10 cm shoot stage)10.1137.61675.515888.2471
INF1Young developing inflorescences (5mm)4.692689.202698.015568.25006
INF2Developing inflorescences (1-1.5 cm)14.048314.626810.758118.9481
ROORoots from the seedlings (10 cm shoot stage)3.765956.447211.632610.2365
NODDeveloping tillers at six leaf stage, 3rd internode5.123629.2466512.343140.9547
CAR5Developing grain, bracts removed (5 DPA)15.94113.807213.309318.6821
CAR15Developing grain, bracts removed (15 DPA)10.30039.7576312.311333.726



CDS Structure of MLOC_32533






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_32533.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_32533.1CUST_4615_PI427708083AvailableAvailablecontig_229501 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g32780.1 +1 2e-14 67 30/42 (71%) 13101.m03305 protein universal stress protein domain containing protein, putative, expressed
TAIR PP10None-----