MLOC_32373 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.988982.437631.952052.72509
LEAShoots from the seedlings (10 cm shoot stage)3.452943.209754.512933.86282
INF1Young developing inflorescences (5mm)2.92233.414653.329383.55248
INF2Developing inflorescences (1-1.5 cm)2.97092.815762.866014.91989
ROORoots from the seedlings (10 cm shoot stage)0.8661691.6667903.60103
NODDeveloping tillers at six leaf stage, 3rd internode1.430752.106581.746448.99556
CAR5Developing grain, bracts removed (5 DPA)4.527543.05632.339473.77591
CAR15Developing grain, bracts removed (15 DPA)00.6526640.3069871.25561



CDS Structure of MLOC_32373






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_32373.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_32373.1CUST_4587_PI427708083AvailableAvailablecontig_2280472 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g31460.1 -1 5e-47 160 78/94 (83%) 13108.m03262 protein GTPase of unknown function domain containing protein, putative, expressed
TAIR PP10 AT1G78010.1 -1 1e-30 114 52/89 (58%) tRNA modification GTPase, putative | chr1:29333535-29336297 FORWARD LENGTH=560