MLOC_3236 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 21.3775 | 13.3858 | 11.0546 | 15.438 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0.0452755 | 0 | 0.0418184 |
| INF1 | Young developing inflorescences (5mm) | 0.018415 | 0 | 0 | 0.016566 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0.0190659 | 0 | 0.037148 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 13.4995 | 8.22177 | 6.11865 | 10.0194 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0.0130735 | 0.0347857 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0.0230599 | 0 | 0.0339785 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_3236
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_3236.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g46520.1 |
-3 |
2e-162 |
475 |
253/419 (60%) |
13105.m04970 protein polygalacturonase, putative, expressed |
| TAIR PP10 |
AT1G80170.1 |
-3 |
1e-80 |
263 |
148/393 (38%) |
Pectin lyase-like superfamily protein | chr1:30153646-30155683 REVERSE LENGTH=444 |