MLOC_32346 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.1000090.1447940.110192
LEAShoots from the seedlings (10 cm shoot stage)0.0858270.18483200.148902
INF1Young developing inflorescences (5mm)0.185528000.176503
INF2Developing inflorescences (1-1.5 cm)0.2590840.0813030.1123140.181703
ROORoots from the seedlings (10 cm shoot stage)0.1018150.1140610.4764950.199286
NODDeveloping tillers at six leaf stage, 3rd internode00.015910.01470880.0924034
CAR5Developing grain, bracts removed (5 DPA)0.1059410.1445310.2198970.178995
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_32346






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_32346.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_32346.1CUST_10952_PI427708080AvailableAvailablecontig_227778 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g23770.1 -2 2e-37 100 53/120 (44%) 13112.m02415 protein retrotransposon protein, putative, LINE subclass
TAIR PP10None-----