MLOC_32302 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8160141.257270.9694611.17832
LEAShoots from the seedlings (10 cm shoot stage)0.8402670.3302650.318010.443549
INF1Young developing inflorescences (5mm)4.082382.858722.799393.19196
INF2Developing inflorescences (1-1.5 cm)3.139643.597992.663664.09045
ROORoots from the seedlings (10 cm shoot stage)00.6200021.458321.3013
NODDeveloping tillers at six leaf stage, 3rd internode1.447121.532473.767126.35766
CAR5Developing grain, bracts removed (5 DPA)2.392552.872453.997013.59129
CAR15Developing grain, bracts removed (15 DPA)1.391170.8632591.487933.24174



CDS Structure of MLOC_32302






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_32302.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_32302.1CUST_10948_PI427708080AvailableAvailablecontig_2273232 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g13660.1 +1 3e-28 108 62/107 (58%) 13107.m01420 protein UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed
TAIR PP10 AT5G05880.1 +1 8e-13 64 33/79 (42%) UDP-Glycosyltransferase superfamily protein | chr5:1769648-1771515 FORWARD LENGTH=451