- Predicted Gene MLOC_32225
MLOC_32225 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_32225_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 17.1108 | 11.0464 | 11.3671 | 12.6125 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 11.2789 | 8.52504 | 10.7449 | 8.38453 |
INF1 | Young developing inflorescences (5mm) | 24.5616 | 28.2955 | 31.0363 | 23.9605 |
INF2 | Developing inflorescences (1-1.5 cm) | 19.9708 | 17.9498 | 25.2391 | 21.8736 |
ROO | Roots from the seedlings (10 cm shoot stage) | 24.206 | 21.7583 | 19.0077 | 24.756 |
NOD | Developing tillers at six leaf stage, 3rd internode | 30.8432 | 30.7416 | 34.2918 | 90.0591 |
CAR5 | Developing grain, bracts removed (5 DPA) | 12.7456 | 12.6192 | 13.1833 | 12.2902 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.86971 | 4.1319 | 4.05141 | 9.54575 |
CDS Structure of MLOC_32225
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_32225.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g62250.1 |
+2 |
1e-76 |
253 |
134/155 (86%) |
13103.m06873 protein zinc finger, C3HC4 type domain containing protein, expressed |
TAIR PP10 |
AT1G72175.1 |
+2 |
1e-71 |
224 |
107/179 (60%) |
RING/U-box protein with domain of unknown function (DUF 1232) | chr1:27157978-27159359 FORWARD LENGTH=185 |