MLOC_32221 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2554450.4378340.5829290.640784
LEAShoots from the seedlings (10 cm shoot stage)0.228940.2592640.135330.27683
INF1Young developing inflorescences (5mm)0.7515041.101031.543741.41562
INF2Developing inflorescences (1-1.5 cm)1.416010.9517131.255211.88194
ROORoots from the seedlings (10 cm shoot stage)0.492950.08691671.345880.54795
NODDeveloping tillers at six leaf stage, 3rd internode1.415930.5198876.421996.6828
CAR5Developing grain, bracts removed (5 DPA)0.5814240.7493370.3449270.877599
CAR15Developing grain, bracts removed (15 DPA)0.2857680.2740920.5683751.40915



CDS Structure of MLOC_32221






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_32221.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_32221.1CUST_12073_PI427708083AvailableAvailablecontig_226383 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g37830.1 +2 3e-21 86 39/45 (87%) 13110.m03441 protein OsFBX391 - F-box domain containing protein, expressed
TAIR PP10 AT3G61060.2 +2 4e-13 61 26/38 (68%) | Symbols: AtPP2-A13, PP2-A13 | phloem protein 2-A13 | chr3:22603166-22604336 FORWARD LENGTH=291