- Predicted Gene MLOC_32200
MLOC_32200 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_32200_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 5.3013 | 9.12178 | 6.03249 | 9.813 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.37601 | 5.65097 | 4.70212 | 5.38844 |
INF1 | Young developing inflorescences (5mm) | 6.54272 | 5.23664 | 4.69126 | 5.93996 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.17338 | 4.09481 | 5.56441 | 6.5724 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.82513 | 4.05589 | 6.33443 | 7.03223 |
NOD | Developing tillers at six leaf stage, 3rd internode | 4.20432 | 5.09305 | 5.05654 | 20.4445 |
CAR5 | Developing grain, bracts removed (5 DPA) | 5.5443 | 4.79157 | 4.3484 | 6.37855 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.1677 | 2.56074 | 2.15639 | 7.61743 |
CDS Structure of MLOC_32200
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_32200.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 | None | - | - | - | - | - |
TAIR PP10 |
AT3G59800.1 |
-3 |
2e-16 |
72 |
43/64 (67%) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G43795.2); Has 15361 Blast hits to 8061 proteins in 537 species: Archae - 2; Bacteria - 622; Metazoa - 7561; Fungi - 1246; Plants - 920; Viruses - 49; Other Eukaryotes - 4961 (source: NCBI BLink). | chr3:22094597-22096174 REVERSE LENGTH=186 |