MLOC_322 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.496780.2399561.0010.752605
LEAShoots from the seedlings (10 cm shoot stage)00.2202290.4051840.390572
INF1Young developing inflorescences (5mm)0.101937000.0961109
INF2Developing inflorescences (1-1.5 cm)0.19113200.2403910.258224
ROORoots from the seedlings (10 cm shoot stage)43.18749.8431435.140919.6824
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)1.305681.08841.702931.35417
CAR15Developing grain, bracts removed (15 DPA)30.236337.664725.900477.5332



CDS Structure of MLOC_322






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_322.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367032NoneNoneNoneNone
MLOC_322.1CUST_25_PI427708080AvailableAvailablecontig_102282 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g04050.1 +1 9e-12 60 30/58 (52%) 13101.m00359 protein BBTI12 - Bowman-Birk type bran trypsin inhibitor precursor, expressed
TAIR PP10None-----