MLOC_32152 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.167673.954274.261292.89552
LEAShoots from the seedlings (10 cm shoot stage)5.057264.402055.880783.44257
INF1Young developing inflorescences (5mm)2.533284.908037.205342.90817
INF2Developing inflorescences (1-1.5 cm)3.573245.297724.579844.04661
ROORoots from the seedlings (10 cm shoot stage)2.800943.712592.437093.18765
NODDeveloping tillers at six leaf stage, 3rd internode3.050656.366611.673916.6719
CAR5Developing grain, bracts removed (5 DPA)4.165713.274132.879262.82035
CAR15Developing grain, bracts removed (15 DPA)1.919542.55041.136563.94207



CDS Structure of MLOC_32152






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_32152.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_32152.1CUST_4560_PI427708083AvailableAvailablecontig_225704 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g06820.2 -1 2e-23 100 47/53 (89%) 13107.m00657 protein serine/threonine-protein kinase RIO-like, putative, expressed
TAIR PP10 AT5G37350.2 -1 1e-25 103 48/53 (91%) Serine/threonine-protein kinase Rio1 | chr5:14793837-14795828 FORWARD LENGTH=385