MLOC_32141 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.191482.098171.481782.16506
LEAShoots from the seedlings (10 cm shoot stage)5.050915.17964.116574.49319
INF1Young developing inflorescences (5mm)2.305771.281461.135581.66037
INF2Developing inflorescences (1-1.5 cm)3.274532.432883.180453.80612
ROORoots from the seedlings (10 cm shoot stage)02.244083.045874.09055
NODDeveloping tillers at six leaf stage, 3rd internode0.7963880.9926361.217023.93926
CAR5Developing grain, bracts removed (5 DPA)7.908154.219995.169676.05845
CAR15Developing grain, bracts removed (15 DPA)7.402833.724644.0721413.2107



CDS Structure of MLOC_32141






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_32141.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_32141.1CUST_10934_PI427708080AvailableAvailablecontig_2255637 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g20270.1 -2 2e-15 72 39/77 (51%) 13111.m02051 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----