- Predicted Gene MLOC_32111
MLOC_32111 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 18.0947 | 14.2467 | 14.5353 | 17.4175 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 11.3766 | 6.07286 | 5.42305 | 6.88641 |
INF1 | Young developing inflorescences (5mm) | 12.8747 | 15.0771 | 15.4543 | 13.9078 |
INF2 | Developing inflorescences (1-1.5 cm) | 9.18507 | 8.60077 | 8.47014 | 10.9223 |
ROO | Roots from the seedlings (10 cm shoot stage) | 16.7389 | 18.6825 | 22.8675 | 26.4604 |
NOD | Developing tillers at six leaf stage, 3rd internode | 32.7775 | 25.688 | 36.2361 | 97.8422 |
CAR5 | Developing grain, bracts removed (5 DPA) | 17.228 | 17.3984 | 18.9478 | 20.3094 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.16601 | 1.07909 | 1.40321 | 3.15909 |
CDS Structure of MLOC_32111
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_32111.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g48640.2 |
+2 |
5e-141 |
419 |
211/297 (71%) |
13107.m05213 protein short-chain dehydrogenase/reductase, putative, expressed |
TAIR PP10 |
AT3G61220.1 |
+2 |
5e-79 |
256 |
138/296 (47%) |
NAD(P)-binding Rossmann-fold superfamily protein | chr3:22663025-22664316 FORWARD LENGTH=296 |