MLOC_32014 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains132.64785.6987118.868119.94
LEAShoots from the seedlings (10 cm shoot stage)270.548293.77114.041212.59
INF1Young developing inflorescences (5mm)9.8911110.899514.554311.3796
INF2Developing inflorescences (1-1.5 cm)15.207211.555412.91115.9709
ROORoots from the seedlings (10 cm shoot stage)37.202428.508931.637240.6775
NODDeveloping tillers at six leaf stage, 3rd internode89.920114.969218.926163.3692
CAR5Developing grain, bracts removed (5 DPA)46.759554.855855.793357.4469
CAR15Developing grain, bracts removed (15 DPA)4.24272.352897.1582710.7607



CDS Structure of MLOC_32014






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_32014.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_32014.1CUST_4542_PI427708083AvailableAvailablecontig_224394 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g11240.1 +1 1e-30 112 56/68 (82%) 13101.m01212 protein DUF538 domain containing protein, putative, expressed
TAIR PP10 AT1G56580.1 +1 3e-12 62 31/69 (45%) | Symbols: SVB | Protein of unknown function, DUF538 | chr1:21198402-21198902 REVERSE LENGTH=166