MLOC_32003 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3731210.8976881.129370.950346
LEAShoots from the seedlings (10 cm shoot stage)0.7209940.832020.9191280.71899
INF1Young developing inflorescences (5mm)0.417930.4880040.4618220.440094
INF2Developing inflorescences (1-1.5 cm)0.6194480.8224550.8742520.912041
ROORoots from the seedlings (10 cm shoot stage)0.469090.8664160.5782910.978867
NODDeveloping tillers at six leaf stage, 3rd internode1.938942.74792.22377.44819
CAR5Developing grain, bracts removed (5 DPA)1.042970.8913670.5412560.870803
CAR15Developing grain, bracts removed (15 DPA)2.058061.44791.593754.44402



CDS Structure of MLOC_32003






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK376617
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376617CUST_23065_PI427708080NoneNoneNone
MLOC_28753.1NoneAvailableNonecontig_1944950 (Mapped)
MLOC_29023.1NoneAvailableNonecontig_1967300 (Not mapped)
MLOC_30322.1NoneAvailableNonecontig_208381 (Mapped)
MLOC_32003.1NoneAvailableAvailablecontig_224317 (Mapped)
MLOC_32837.2NoneAvailableNonecontig_232401 (Mapped)
MLOC_33118.1NoneAvailableNonecontig_2346109 (Mapped)
MLOC_40680.1NoneAvailableNonecontig_2562902 (Not mapped)
MLOC_41632.1NoneAvailableNonecontig_2598202 (Not mapped)
MLOC_47087.1NoneAvailableNonecontig_30045 (Not mapped)
MLOC_53109.1NoneAvailableNonecontig_380657 (Mapped)
MLOC_77616.1NoneAvailableNonecontig_764078 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----