MLOC_31989 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.538711.419966.069112.7032
LEAShoots from the seedlings (10 cm shoot stage)1.133311.2773101.03113
INF1Young developing inflorescences (5mm)01.272043.729623.02317
INF2Developing inflorescences (1-1.5 cm)3.2848202.783652.20596
ROORoots from the seedlings (10 cm shoot stage)02.295232.091383.97781
NODDeveloping tillers at six leaf stage, 3rd internode2.03161.84215.8307212.1079
CAR5Developing grain, bracts removed (5 DPA)2.8554.46922.10614.13428
CAR15Developing grain, bracts removed (15 DPA)1.7346501.777033.98948



CDS Structure of MLOC_31989






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_31989.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_31989.1CUST_4539_PI427708083AvailableAvailablecontig_2241433 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g05280.1 -1 8e-25 96 44/52 (85%) 13105.m00547 protein zinc finger family protein, putative, expressed
TAIR PP10 AT3G47990.1 -1 2e-22 88 37/42 (88%) | Symbols: SIS3 | SUGAR-INSENSITIVE 3 | chr3:17713367-17716051 REVERSE LENGTH=358