- Predicted Gene MLOC_31969
MLOC_31969 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.44063 | 5.14917 | 6.64654 | 5.77611 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 5.3547 | 3.96267 | 4.03511 | 3.59939 |
| INF1 | Young developing inflorescences (5mm) | 3.62254 | 4.44566 | 3.86209 | 3.36431 |
| INF2 | Developing inflorescences (1-1.5 cm) | 5.72592 | 5.78231 | 5.94512 | 6.24237 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 9.35542 | 8.94253 | 8.94393 | 10.0014 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 5.38383 | 5.36434 | 5.43328 | 15.953 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.85489 | 7.17541 | 7.53888 | 6.82155 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.74474 | 4.06953 | 4.28358 | 9.34108 |
CDS Structure of MLOC_31969
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_31969.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g67040.2 |
+2 |
3e-152 |
443 |
238/274 (87%) |
13101.m07269 protein OsRhmbd5 - Putative Rhomboid homologue, expressed |
| TAIR PP10 |
AT3G59520.1 |
+2 |
2e-121 |
363 |
194/266 (73%) |
| Symbols: ATRBL13, RBL13 | RHOMBOID-like protein 13 | chr3:21992054-21992863 FORWARD LENGTH=269 |