MLOC_31966 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.169772.709911.909582.1706
LEAShoots from the seedlings (10 cm shoot stage)6.613344.41011.743363.64671
INF1Young developing inflorescences (5mm)4.549534.656844.341194.18384
INF2Developing inflorescences (1-1.5 cm)8.174229.274369.2279410.293
ROORoots from the seedlings (10 cm shoot stage)02.273441.983723.5701
NODDeveloping tillers at six leaf stage, 3rd internode0.2525170.9580151.659993.35232
CAR5Developing grain, bracts removed (5 DPA)8.984024.454593.666725.66214
CAR15Developing grain, bracts removed (15 DPA)7.412076.566758.3991817.549



CDS Structure of MLOC_31966






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_31966.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_31966.1NoneAvailableAvailablecontig_2239384 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g45290.1 +3 3e-20 87 38/64 (59%) 13101.m04644 protein retrotransposon protein, putative, unclassified, expressed
TAIR PP10None-----