- Predicted Gene MLOC_31966
MLOC_31966 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_31966_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_31966_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.16977 | 2.70991 | 1.90958 | 2.1706 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 6.61334 | 4.4101 | 1.74336 | 3.64671 |
INF1 | Young developing inflorescences (5mm) | 4.54953 | 4.65684 | 4.34119 | 4.18384 |
INF2 | Developing inflorescences (1-1.5 cm) | 8.17422 | 9.27436 | 9.22794 | 10.293 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 2.27344 | 1.98372 | 3.5701 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.252517 | 0.958015 | 1.65999 | 3.35232 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.98402 | 4.45459 | 3.66672 | 5.66214 |
CAR15 | Developing grain, bracts removed (15 DPA) | 7.41207 | 6.56675 | 8.39918 | 17.549 |
CDS Structure of MLOC_31966
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_31966.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g45290.1 |
+3 |
3e-20 |
87 |
38/64 (59%) |
13101.m04644 protein retrotransposon protein, putative, unclassified, expressed |
TAIR PP10 | None | - | - | - | - | - |