MLOC_31807 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains28.917621.927.436630.8469
LEAShoots from the seedlings (10 cm shoot stage)55.8903110.694114.984100.404
INF1Young developing inflorescences (5mm)13.368715.57317.996615.9767
INF2Developing inflorescences (1-1.5 cm)18.654214.861621.320521.895
ROORoots from the seedlings (10 cm shoot stage)33.731837.023337.993155.2652
NODDeveloping tillers at six leaf stage, 3rd internode16.609816.80148.0974657.9706
CAR5Developing grain, bracts removed (5 DPA)16.301719.180915.69619.6237
CAR15Developing grain, bracts removed (15 DPA)9.0649.0336111.807326.1208



CDS Structure of MLOC_31807






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_31807.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368969NoneNoneNoneNone
MLOC_31807.1CUST_2122_PI427708080AvailableAvailablecontig_222514 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g45640.1 -2 3e-31 115 72/130 (55%) 13101.m04683 protein tat pathway signal sequence family protein, expressed
TAIR PP10None-----