MLOC_31665 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.79661.949162.449582.09631
LEAShoots from the seedlings (10 cm shoot stage)0.1377812.176461.778270.81543
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)1.939981.467391.601961.38345
NODDeveloping tillers at six leaf stage, 3rd internode9.6166815.237315.13331.8781
CAR5Developing grain, bracts removed (5 DPA)00.15998700.154985
CAR15Developing grain, bracts removed (15 DPA)0.057985600.1639280.293191



CDS Structure of MLOC_31665






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_31665.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_31665.2CUST_10884_PI427708080AvailableAvailablecontig_221143 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g15630.1 -3 8e-31 115 79/139 (57%) 13105.m01647 protein membrane associated DUF588 domain containing protein, putative, expressed
TAIR PP10 AT4G03540.1 -3 1e-17 79 58/135 (43%) Uncharacterised protein family (UPF0497) | chr4:1570042-1571483 FORWARD LENGTH=164