MLOC_31664 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains46.216930.374531.992223.5411
LEAShoots from the seedlings (10 cm shoot stage)15.413311.903216.02278.10361
INF1Young developing inflorescences (5mm)28.509333.653337.888916.4339
INF2Developing inflorescences (1-1.5 cm)13.757117.467820.547211.8851
ROORoots from the seedlings (10 cm shoot stage)20.374221.331528.973815.8563
NODDeveloping tillers at six leaf stage, 3rd internode5.146474.600928.7787711.5046
CAR5Developing grain, bracts removed (5 DPA)13.693215.411314.34098.68561
CAR15Developing grain, bracts removed (15 DPA)2.61424.01891.61994.00679



CDS Structure of MLOC_31664






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_31664.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_31664.1NoneAvailableAvailablecontig_221143 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g15610.1 +1 5e-15 73 31/33 (94%) 13102.m01741 protein 40S ribosomal protein S15a, putative, expressed
TAIR PP10 AT2G19720.1 +1 3e-13 67 26/33 (79%) | Symbols: rps15ab | ribosomal protein S15A B | chr2:8510223-8511258 REVERSE LENGTH=129