MLOC_31594 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.236558.549910.03746.25657
LEAShoots from the seedlings (10 cm shoot stage)7.204567.146649.804235.21915
INF1Young developing inflorescences (5mm)9.8465111.620615.22436.8188
INF2Developing inflorescences (1-1.5 cm)16.66916.842116.415513.6347
ROORoots from the seedlings (10 cm shoot stage)6.863718.5033513.35577.46891
NODDeveloping tillers at six leaf stage, 3rd internode7.076288.9763210.078824.9164
CAR5Developing grain, bracts removed (5 DPA)8.2494410.42410.16876.44475
CAR15Developing grain, bracts removed (15 DPA)4.963484.830434.598127.98372



CDS Structure of MLOC_31594






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_31594.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_31594.2CUST_4487_PI427708083AvailableAvailablecontig_220384 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g46710.1 +1 1e-26 114 50/56 (89%) 13103.m05027 protein expressed protein
TAIR PP10 AT1G61690.1 +1 2e-23 103 43/57 (75%) phosphoinositide binding | chr1:22782825-22786782 REVERSE LENGTH=1171