MLOC_31564 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.23591.09621.80481.6585
LEAShoots from the seedlings (10 cm shoot stage)1.004071.318141.469431.16594
INF1Young developing inflorescences (5mm)2.056623.536523.348982.55427
INF2Developing inflorescences (1-1.5 cm)4.127394.130665.540945.01711
ROORoots from the seedlings (10 cm shoot stage)0.6296832.305512.134032.78414
NODDeveloping tillers at six leaf stage, 3rd internode1.890682.012511.631366.74582
CAR5Developing grain, bracts removed (5 DPA)4.756464.372694.417984.55507
CAR15Developing grain, bracts removed (15 DPA)1.859882.426192.193395.19728



CDS Structure of MLOC_31564






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_31564.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_31564.1CUST_12051_PI427708083AvailableAvailablecontig_220125 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g74580.2 +2 6e-35 131 66/76 (87%) 13101.m08153 protein dnaJ homolog subfamily C member, putative, expressed
TAIR PP10 AT5G03160.1 +2 2e-28 112 55/77 (71%) | Symbols: ATP58IPK, P58IPK | homolog of mamallian P58IPK | chr5:750286-752671 FORWARD LENGTH=482