MLOC_31523 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.6425972.32782.877151.12161
LEAShoots from the seedlings (10 cm shoot stage)3.268055.212723.511872.13259
INF1Young developing inflorescences (5mm)2.608772.78424.330841.61973
INF2Developing inflorescences (1-1.5 cm)3.729953.759412.138172.58329
ROORoots from the seedlings (10 cm shoot stage)1.32641.565351.216181.1227
NODDeveloping tillers at six leaf stage, 3rd internode2.110812.851292.438316.06293
CAR5Developing grain, bracts removed (5 DPA)2.259112.627572.020481.44911
CAR15Developing grain, bracts removed (15 DPA)1.433091.218851.393372.09736



CDS Structure of MLOC_31523






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_31523.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_31523.1CUST_17630_PI427708080AvailableAvailablecontig_219800 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g16960.1 +1 4e-20 91 43/54 (80%) 13107.m01776 protein glycosyl transferase, group 1 domain containing protein, expressed
TAIR PP10 AT3G45100.2 +1 1e-14 74 33/36 (92%) | Symbols: SETH2 | UDP-Glycosyltransferase superfamily protein | chr3:16504648-16506858 FORWARD LENGTH=447