- Predicted Gene MLOC_31479
MLOC_31479 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_31479_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_31479_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 3.00168 | 5.84807 | 5.01306 | 4.9287 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.21761 | 5.09533 | 6.40321 | 4.37452 |
INF1 | Young developing inflorescences (5mm) | 2.47823 | 4.75409 | 4.14773 | 2.95885 |
INF2 | Developing inflorescences (1-1.5 cm) | 8.7193 | 7.36885 | 6.76881 | 8.34306 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.41609 | 2.76602 | 2.63207 | 3.68423 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.30725 | 3.47624 | 5.48111 | 13.1493 |
CAR5 | Developing grain, bracts removed (5 DPA) | 5.96142 | 5.31075 | 6.15852 | 5.39209 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.37841 | 4.69268 | 4.93201 | 10.9902 |
CDS Structure of MLOC_31479
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_31479.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g09252.1 |
+1 |
6e-39 |
136 |
65/84 (77%) |
13101.m00982 protein WD domain, G-beta repeat domain containing protein, expressed |
TAIR PP10 |
AT5G51980.1 |
+1 |
3e-22 |
93 |
42/89 (47%) |
Transducin/WD40 repeat-like superfamily protein | chr5:21113650-21115902 REVERSE LENGTH=437 |