MLOC_31453 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2165880.1801100.271895
LEAShoots from the seedlings (10 cm shoot stage)0.94080900.3019080.617954
INF1Young developing inflorescences (5mm)0.8359321.226451.897591.2386
INF2Developing inflorescences (1-1.5 cm)2.485561.570141.984172.34774
ROORoots from the seedlings (10 cm shoot stage)0.7582760.19918200.713431
NODDeveloping tillers at six leaf stage, 3rd internode000.2377010.48458
CAR5Developing grain, bracts removed (5 DPA)1.334750.5196970.7895720.864197
CAR15Developing grain, bracts removed (15 DPA)1.36480.9139960.7604782.65616



CDS Structure of MLOC_31453






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_31453.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_31453.1CUST_10866_PI427708080AvailableAvailablecontig_2190555 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g16246.1 +3 4e-12 61 28/75 (37%) 13111.m09138 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----