MLOC_31360 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.035918800.0720944
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)00.04275270.09809140.092005
NODDeveloping tillers at six leaf stage, 3rd internode0.09771520.1072070.06739850.283654
CAR5Developing grain, bracts removed (5 DPA)15.830719.921116.298517.9951
CAR15Developing grain, bracts removed (15 DPA)11.34311.920514.417931.4862



CDS Structure of MLOC_31360






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_31360.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372993NoneNoneNoneNone
MLOC_31360.1CUST_2119_PI427708080AvailableAvailablecontig_218189 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g19420.1 +1 3e-172 493 259/375 (69%) 13108.m02022 protein O-methyltransferase, putative, expressed
TAIR PP10 AT4G35160.1 +1 1e-56 195 134/366 (37%) O-methyltransferase family protein | chr4:16730989-16732808 REVERSE LENGTH=382