MLOC_31340 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.470666.591918.789039.08505
LEAShoots from the seedlings (10 cm shoot stage)10.54695.723925.41327.22785
INF1Young developing inflorescences (5mm)22.400324.882227.301233.3157
INF2Developing inflorescences (1-1.5 cm)41.212444.36642.31860.7391
ROORoots from the seedlings (10 cm shoot stage)6.6369411.11559.8084118.0463
NODDeveloping tillers at six leaf stage, 3rd internode8.611319.964568.6017637.7838
CAR5Developing grain, bracts removed (5 DPA)25.501326.176227.219232.8599
CAR15Developing grain, bracts removed (15 DPA)8.120925.168827.4589220.7361



CDS Structure of MLOC_31340






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_31340.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_31340.1CUST_4448_PI427708083AvailableAvailablecontig_21804 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g04310.2 -3 1e-24 99 49/87 (56%) 13103.m00439 protein BHLH transcription factor, putative, expressed
TAIR PP10 AT5G65640.1 -3 1e-27 106 51/88 (58%) | Symbols: bHLH093 | beta HLH protein 93 | chr5:26237137-26238904 FORWARD LENGTH=351